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SAM flags explained | Understanding SAM flags in a SAM/BAM file | Bioinformatics 101
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In this video I explain what are SAM flags, why is it important to understand them, how to decode SAM flags and determine the combination of flags.
I hope you find this video helpful! Leave your thoughts in the comment section below!
Link to SAM/BAM file format video:
SAM file format manual:
Chapters:
0:00 Intro
1:23 SAM flags
3:16 Combination of SAM flags
3:59 Why is it important to know SAM flags and how are they useful?
4:40 Decoding SAM flag combinations
You can show your support and encouragement by buying me a coffee:
To get in touch:
#bioinformagician #bioinformatics #samflag #sam #bam #alignment #phred #fasta #fastq #singlecell #10X #ensembl #biomart #annotationdbi #annotables #affymetrix #microarray #affy #ncbi #genomics #beginners #tutorial #howto #omics #research #biology #GEO #rnaseq #ngs
I hope you find this video helpful! Leave your thoughts in the comment section below!
Link to SAM/BAM file format video:
SAM file format manual:
Chapters:
0:00 Intro
1:23 SAM flags
3:16 Combination of SAM flags
3:59 Why is it important to know SAM flags and how are they useful?
4:40 Decoding SAM flag combinations
You can show your support and encouragement by buying me a coffee:
To get in touch:
#bioinformagician #bioinformatics #samflag #sam #bam #alignment #phred #fasta #fastq #singlecell #10X #ensembl #biomart #annotationdbi #annotables #affymetrix #microarray #affy #ncbi #genomics #beginners #tutorial #howto #omics #research #biology #GEO #rnaseq #ngs
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