Your Body's Molecular Machines

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Special thanks to Patreon supporters:
Joshua Abenir, Tony Fadell, Donal Botkin, Jeff Straathof, Zach Mueller, Ron Neal, Nathan Hansen

Every day in an adult human roughly 50-70 billion of your cells die. They may be damaged, stressed, or just plain old - this is normal, in fact it’s called programmed cell death.

To make up for that loss, right now, inside your body, billions of cells are dividing, creating new cells.

And cell division, also called mitosis, requires an army of tiny molecular machines.DNA is a good place to start - the double helix molecule that we always talk about.

This is a scientifically accurate depiction of DNA. If you unwind the two strands you can see that each has a sugar phosphate backbone connected to the sequence of nucleic acid base pairs, known by the letters A,T,G, and C.

Now the strands run in opposite directions, which is important when you go to copy DNA. Copying DNA is one of the first steps in cell division. Here the two strands of DNA are being unwound and separated by the tiny blue molecular machine called helicase.
It literally spins as fast as a jet engine! The strand of DNA on the right has its complimentary strand assembled continuously but the other strand is more complicated because it runs in the opposite direction.
So it must be looped out with its compliment strand assembled in reverse, section by section. At the end of this process you have two identical DNA molecules, each one a few centimeters long but just a couple nanometers wide.

To prevent the DNA from becoming a tangled mess, it is wrapped around proteins called a histones, forming a nucleosome.
These nucleosomes are bundled together into a fiber known as chromatin, which is further looped and coiled to form a chromosome, one of the largest molecular structures in your body.
You can actually see chromosomes under a microscope in dividing cells - only then do they take on their characteristic shape.

The process of dividing the cell takes around an hour in mammals. This footage is from a time lapse. You can see how the chromosomes line up on the equator of the cell. When everything is right they are pulled apart into the two new daughter cells, each one containing an identical copy of DNA.
As simple as it looks, this process is incredibly complicated and requires even more fascinating molecular machines to accomplish it. Let’s look at a single chromosome. One chromosome consists of two sausage-shaped chromatids - containing the identical copies of DNA made earlier. Each chromatid is attached to microtubule fibers, which guide and help align them in the correct position. The microtubules are connected to the chromatid at the kinetochore, here colored red.
The kinetochore consists of hundreds of proteins working together to achieve multiple objectives - it’s one of the most sophisticated molecular mechanisms inside your body. The kinetochore is central to the successful separation of the chromatids. It creates a dynamic connection between the chromosome and the microtubules. For a reason no one’s yet been able to figure out, the microtubules are constantly being built at one end and deconstructed at the other.
While the chromosome is still getting ready, the kinetochore sends out a chemical stop signal to the rest of the cell, shown here by the red molecules, basically saying this chromosome is not yet ready to divide
The kinetochore also mechanically senses tension. When the tension is just right and the position and attachment are correct all the proteins get ready, shown here by turning green.
At this point the stop signal broadcasting system is not switched off. Instead it is literally carried away from the kinetochore down the microtubules by a dynein motor. This is really what it looks like. It has long ‘legs’ so it can avoid obstacles and step over the kinesins, molecular motors walking the other direction.

Studio filming by Raquel Nuno
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47 trillion ATPs were harmed in the making of this video

besmart
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I feel like a planet now. Like I'm home to these little guys that work so hard every day. So crazy

armada
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I am giving my body way to little appreciation.

Microbex
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A genetics class that I took before starting medical school was one of my favorite classes of all time, but I have never seen a 3-D animation of what the molecular machines look like. This is fascinating. Thank you.

grkuntzmd
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Thank you tiny guys working hard inside me. Your hard work is appreciated . I will eat healthier and exercise more and tried to be less stressful to make the work a little easier for y’all.

Kazuma_Deu
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I absolutely love knowing that my body is full of Little Guys running around. Next time I get into a depression I will try reminding myself that the Little Guys are working very hard to keep me going.

laurachapple
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I need some of those helicase machines to untangle my earphones.

AutPen
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Hats off to the guys who made the animation, it is just fantastic

shreeshavitthala
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I need more animations like this; it's really fascinating to learn this stuff and a lot easier with accurate physical representation

craftboy
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I want so much more of this caliber of accurate visuals. This is time spent advancing human kind. Well done!

mikey.p
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Whenever people call me lazy again i'll show them this video, just living takes a lot of work, if I was truly lazy i would be dead.

DanielCoutoF
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Watching these extremely complex molecular machines is mind blowing! Everything works so perfectly between each other in a very creative way. We have so much more to learn. It should deserve more attention in school.

alexmendez
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One of the trippiest things ever to me is to simply be alive.

Ihaveausernametoo
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This is like a symphony played by an orchestra of physics, biology and chemistry. So amazing how everything works together.

JakeVermont
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I am ashamed that so many mechanisms in each of my cells are working hard for my meaningless life

КостюкевичЮрий
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One aspect of all this that I would like to see explored is the why and how, of these things actually 'walking' along the strands. This seems more mechanical in nature (rather than chemical or reactive), so it begs deeper questions of the mecahinics such as to why did they evolve the process in this way? Do they have joints? Do they carry their energy fuel with them? Can they run out of this fuel and what does that mean for the success of the larger purpose? (Etc, etc) In my mind, understanding the unique ways our cells communicate (and why they communicate that way) are the hidden keys to understanding 'life'.

gobeaugo
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DNA replication is such a fascinating topic
I just did an assessment on it and it’s so intricate. And that’s just at a high school level. There’s tonnes of other more minor roleplayers and small overlooked details that exist where you may be able to explain the process without them, but you’ll never grasp the full extend of the process if you omit their presence.

firenzarfrenzy
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Props to the camera man that had to go through the inconvenient hassle of shrinking himself by 10s of 1000s of times and float through your body and get good shots of all the different components you talked about despite having no previous training or experience in this field.

litlehedgehog_
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Sometimes we’re waiting for a miracle to happen in our lives when in fact they’re happening in our bodies all the time.

KeepingOnTheWatch
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я не верю, что всё, что делается внутри нас, в мире, в природе и во вселенной - просто идет по слепой эволюционной дорожке, слишком всё разумно и шедеврально устроено в нашем мире.

LEELlu