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How to take a sequence as an input and convert it into a sequence object in BioPython

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In this video I will explain how you can take a sequence as an input and convert it into a sequence object using BioPython.
First what we will do is take the input from the user to enter the sequence (DNA/protein sequence) and pass it to that sequence function which we imported from Bio.Seq class. So when we directly pass the input inside the sequence function, it converts into a sequence object. Then we are storing this sequence object inside a variable called myDNA and printing it out.
Join BioCode’s Advanced Bioinformatics Scripting in Python, BioPython, R & BioConductor course to intensify your biological programming career by learning through various useful & informative pre-recorded lectures on various biological programming/scripting languages. This course includes:
-Introduction to Python, BioPython, R, Linux & BioConductor
-BLAST Database Searching, Parsing and Extraction
-Sequence Analysis, Sequence Data Parsing, Sequence Retrieval and Alignment
-Phylogenetic Analysis
-Processing and Analysis of Biological Datasets
-Data Visualization: ggplot2
-Bioinformatics File Parsing and Writing
-Gene Enrichment Analysis
-MicroArray Analysis: BioConductor
-RNA-Seq Analysis
-Variant Calling
To learn more about Python/BioPython DM us, we can help you get started. BioCode provides an interactive platform to learn biological programming in Python & R, bioinformatics techniques, tools, databases, and biological data analysis in a cooperative manner covering both theoretical and practical aspects of the computational biology topics. BioCode provides you with videos regarding every topic along with exercises. BioCode gives you the opportunity to learn at your pace according to your own schedule. Along with every video BioCode provides you with the transcriptions and powerpoint presentation regarding that topic. In case you have any query during the lectures, there’s a dedicated section available for you to ask questions from your tutor.
#bioinformatics #computationalbiology #datascience #biology #biotechnology #scripting #coding #molecularbiology #programming #learncode #datavisualization #dataanalysis #drugdesigning #science #evolution #learn #biochemistry #microbiology #zoology #courses #python #immunology #shorts
First what we will do is take the input from the user to enter the sequence (DNA/protein sequence) and pass it to that sequence function which we imported from Bio.Seq class. So when we directly pass the input inside the sequence function, it converts into a sequence object. Then we are storing this sequence object inside a variable called myDNA and printing it out.
Join BioCode’s Advanced Bioinformatics Scripting in Python, BioPython, R & BioConductor course to intensify your biological programming career by learning through various useful & informative pre-recorded lectures on various biological programming/scripting languages. This course includes:
-Introduction to Python, BioPython, R, Linux & BioConductor
-BLAST Database Searching, Parsing and Extraction
-Sequence Analysis, Sequence Data Parsing, Sequence Retrieval and Alignment
-Phylogenetic Analysis
-Processing and Analysis of Biological Datasets
-Data Visualization: ggplot2
-Bioinformatics File Parsing and Writing
-Gene Enrichment Analysis
-MicroArray Analysis: BioConductor
-RNA-Seq Analysis
-Variant Calling
To learn more about Python/BioPython DM us, we can help you get started. BioCode provides an interactive platform to learn biological programming in Python & R, bioinformatics techniques, tools, databases, and biological data analysis in a cooperative manner covering both theoretical and practical aspects of the computational biology topics. BioCode provides you with videos regarding every topic along with exercises. BioCode gives you the opportunity to learn at your pace according to your own schedule. Along with every video BioCode provides you with the transcriptions and powerpoint presentation regarding that topic. In case you have any query during the lectures, there’s a dedicated section available for you to ask questions from your tutor.
#bioinformatics #computationalbiology #datascience #biology #biotechnology #scripting #coding #molecularbiology #programming #learncode #datavisualization #dataanalysis #drugdesigning #science #evolution #learn #biochemistry #microbiology #zoology #courses #python #immunology #shorts