NCBI NOW, Lecture 7, Using BLAST for Genomic Analysis

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Most investigators interested in next generation sequencing (NGS) are familiar with NCBI BLAST. Dr. Tom Madden will demonstrate tools for using BLAST to investigate NGS datasets, in either a web interface or the Linux command line.
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Hello. In the graphic summary of the Blast sometimes appear some separate regions joined by a horizontal black line and other times without this line. What does this mean? Thank you

JOSELUIS-oeln