Welcome to GenePattern Notebook 2018

This video provides a brief introduction to the core features of GenePatternNotebook, accompanied by a demonstration of how to create an executable RNA-seq analysis notebook from scratch, without the need to write code. Feature links:

0:47 - Basic features: Create notebooks, Insert and modify text, tables, and images
2:42 - GenePattern enhancements: find and run GenePattern analyses
3:53 - User Interface builder for Python functions
5:54 - Visualization and further analysis

GenePattern Notebook Environment:

Learn more at:

Reference:

Video created by:
Barbara Hill, The Broad Institute
Forrest Kim, UC San Diego

[andrewildberg]

You can say "simply" as much as you like, that doesn't make it easy or accessible. Without deep knowledge of the modules your are simply lost. Generalization and unification is desperately needed in genome data analysis and I highly appreciate the attempt, though.