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cBioPortal Webinar 1: Introduction
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Introduction to using cBioPortal. This video provides an overview of basic usage of cBioPortal, including data exploration using the interactive study view, group comparison functionality, and querying specific genes for gene-based analysis.
Recording of a webinar given on April 30, 2020.
0:00 Overview of webinars
1:45 Overview of cBioPortal
10:22 Homepage
12:40 Study View
17:02 Patient View from Study View
18:45 Group Comparison from a Study View chart
24:22 Query from Study View
25:14 Query from homepage
28:02 OncoPrint tab
28:41 Modify query
29:42 OncoPrint tab
30:22 Mutual Exclusivity tab
30:41 OncoPrint tab
33:44 Cancer Types Summary tab
34:20 Plots tab
35:49 Mutations tab
37:57 Co-expression tab
38:54 Comparison/Survival tab
40:49 CN Segments tab
41:52 Pathways tab
42:23 Download tab
43:30 Multi-study query
44:22 Wrap-up
46:00 Q&A
Recording of a webinar given on April 30, 2020.
0:00 Overview of webinars
1:45 Overview of cBioPortal
10:22 Homepage
12:40 Study View
17:02 Patient View from Study View
18:45 Group Comparison from a Study View chart
24:22 Query from Study View
25:14 Query from homepage
28:02 OncoPrint tab
28:41 Modify query
29:42 OncoPrint tab
30:22 Mutual Exclusivity tab
30:41 OncoPrint tab
33:44 Cancer Types Summary tab
34:20 Plots tab
35:49 Mutations tab
37:57 Co-expression tab
38:54 Comparison/Survival tab
40:49 CN Segments tab
41:52 Pathways tab
42:23 Download tab
43:30 Multi-study query
44:22 Wrap-up
46:00 Q&A
0:57:40
cBioPortal Webinar 1: Introduction
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cBioPortal Webinar 2: Mutation Details & Patient View
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cBioPortal Webinar 4: Group Comparison
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cBioPortal Tutorial Series: Navigating a single study
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ICRN: Introduction to cBioPortal for Cancer Genomics
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cBioPortal Tutorial Series: Introduction & Homepage Navigation
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cBioPortal Tutorial Series: Introduction to the cBioPortal
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The cBioPortal and OncoKB: Making complex cancer genomics data accessible and interpretable
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Data-integration platform for cancer research: cBioportal demo
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cBioPortal: Exploring the longitudinal evolution of individual patients
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cBioPortal: Comparing samples based on expression level of a gene
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cBioPortal: Filtering and adding clinical data to Mutations tab
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cBioPortal Tutorial Series: Sorting a single study by gene
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cBioPortal Webinar 5: API & R Client
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cBioPortal: How to explore a study
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cBioPortal Tutorial Series: Searching for a gene of interest
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cBioPortal database Part I
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cBioPortal Basics - Oncoprints
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cBioPortal Tutorial Series: Locating individual patient data
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cBioPortal proteomics
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cBioPortal Webinar 3: Expression Data Analysis
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cBioPortal for Human Cancer Genomics and why you should analyze the source data yourself
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Genomics and clinical data at your fingertips with open source software tranSMART & cBioPortal
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Lecture 7 : Introduction to Genomics: cBioPortal
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