Python Bioinformatics : How to count nucleotides in DNA sequences

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How to count mono_nucleotides [ nucleotide frequency parameters]. There are several methods that one could use to count nucleotides, in this video i show a simple straight forward method. I will continue with the nucleotide proportions in the next coming videos.
  1. Shad Arf
  2. how to
  3. count nucleotides
  4. nucleotide proportions
  5. python 3
  6. python3.5
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Комментарии
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Thanks Mr Arf, It is easy and helpful program.

abdalmohaimen
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Dear Dr. Shad Arf
How to count mono and di nucleotide from FASTA file and download in csv format in python or other ways? What code will do that.Thank you Sir!

Sol-knyv
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doc, i want to ask a simple question:
dna sequences is very long(several lines), when i copy one sequence in pycharm, pycharm can only read one line of the whole sequence. what should i write to let pycharm read the whole sequece?? thank you so much doctor!

xiaoqingpan
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thanks teacher ir was actually very easy and simple cuz you made it like that even though I don't have any background information about paython.

deedarwahab
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I'm getting the output wrong.
While copy paste the nucleotide sequence it is coming discontinuously and after giving double quotes" " at the 1st & last of the sequence only the 1st line of the sequence was changed to green colour rest of the lines remains black colour, beacuse of this my output was not correct. How to change the whole sequence to green colour?

jansiranim
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would you mind sharing the video compressed into one video

makepistat
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its a great tutorial but i am not able to run any of the commands.its asking to define the DNA. can you please explain how to start using python. i am just stuck up with this python.

priyankavats
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Sir plz upload video for using
c programming in bioinformatics

prasanthprasanth
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Hi great tutorial, however when I run my program and input my DNA sequence it appears only the first line of nucleotides are calculated. Is there any way to fix this ?

Kind regards

kevinrooney
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I like it very much. Where can I get more information about this?! I am very interested (also, I am a biologist)

giorgibakuradze