Bioinformatics in Python: DNA Toolkit. Part 6: Protein search in a reading frame

🚀 [DESCRIPTION]:

In this video, we add a powerful function to our DNA Toolkit: one that scans reading frames and efficiently extracts protein sequences. This brings us closer to a complete protein prediction pipeline!
#Bioinformatics #Python #DNAToolkit #Proteins #ReadingFrames #CodingTutorial

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[peciuma]

Just found your channel. Thank you for creating these videos and sharing them!

[sohamshirolkar]

awesome function...learnt so much and good explanation as well...

[facetme]

Great video. Thanks. For this function, I tried iterating the aa sequence from the end. Mark the current "_" as an end. Append every seq with newly found “M” to proteins[]. It seems less time and space used.

[abdulrhmana.elshiekh]

I didn't understand the last for loop "for i in range(len(current_prot))" It should append the element in the 0th position, am I right?, then after each iteration it should append to the last position, what did i get wrong

[petrossss]

Hi, first of all, you do perfekt Videos! Amazing ! I am a newbie and i have a question . if i run the code i take this results : The Proteins from this sequance are : ["M', 'G', 'K', 'I', '"], normally i must take results like this : The Proteins from this sequance are : ['MGKI'] . But there are separate with comma ! The code is like this video and for the print in main, i write this , print("The Proteins from this sequance are : " + protein_transl) !
if someone knows where is the mistakes let me please know ! Thanks in Advance !