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Read FASTA files with Python for Bioinformatics | Part 2
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This tutorial shows you how to read multi-fasta files using the python bioinformatics package, biopython.
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Materials
________________________________________________________________________________________________
Read about Fasta files here
Download the example data using the link below
Learn how to install python libraries using the tutorial here
Chapters
00:17 Introduction
01:28 Import Libraries
02:48 Set the file path
03:24 Read fasta file
05:44 Explore the opened fasta file
13:07 Using pandas to handle the analysis
17:!2 Save result to output file
Additional Video materials for Python beginners
Commands used
from Bio import SeqIO
SeqIO.parse
SeqIO.write
#bioinformatics #bioinformática #bioinformaticsforbeginners #python
Support my work by buying Me a Coffee
Support My Work
Subscribe to my channels
Reach out
Materials
________________________________________________________________________________________________
Read about Fasta files here
Download the example data using the link below
Learn how to install python libraries using the tutorial here
Chapters
00:17 Introduction
01:28 Import Libraries
02:48 Set the file path
03:24 Read fasta file
05:44 Explore the opened fasta file
13:07 Using pandas to handle the analysis
17:!2 Save result to output file
Additional Video materials for Python beginners
Commands used
from Bio import SeqIO
SeqIO.parse
SeqIO.write
#bioinformatics #bioinformática #bioinformaticsforbeginners #python
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