No Code Seurat Analysis | Azimuth First Look

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Most people dealing with data actually spent 80% of time cleaning the data and another 20% complaining about data not being clean in the first place. Developed as a Seurat extension, Azimuth aims to help to bypass most of the coding process to get from Seurat data directly into visualization and some simple data table.

Being new, I am just trying out this for about 2 days and this is what i find so far.

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I am installing Azimuth in my seurat env in the cluster it does not work it keep asking that I am missing packages even though properly connect my R with Jupyter notebook. it is so difficult.

johnli
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Im having a problem running Azimuth on my R studio. Did you happen to get it to work?

nikolaik
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I am having issues installing Azimuth on R, did you run into any of these?

simonekats
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