MD cyclohexane-trisamide 200 to 800 K

This simulation shows how stable are supramolecular columns formed by cyclohexane-trisamides. The Molecular Dynamics was carried out with TINKER (pbc, MMFF94). Different views of the system are shown: top view (up, left), side view emphasizing the hydrogen bonds (blue lines), and side and top view of the central column.
More movies on molecular modeling are available at the YouTube channel "Molecular Modeling Tutorial".