Metagenomics Analysis- Day 1

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This workshop provides an introduction to the microbiome analyses from the raw sequence data generated from the next-generation sequencing platforms. We will cover how to perform the 16S rRNA-based analysis using an open-source bioinformatics pipeline QIIME. We will also cover some downstream analyses of the microbiome data beyond QIIME, including statistical analyses and functional analyses.

  1. UCLA QCBio Collaboratory
  2. Metagenomics
  3. RNA-Seq
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Metagenomics Analysis- Day 2:44:57

Metagenomics Analysis- Day 1

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Functional Analysis of 0:30:55

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Metagenomic Inference 0:36:39

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Analysis of Metagenomic 1:16:44

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Metagenome Assembly, Binning, 0:44:08

Metagenome Assembly, Binning, and Extracting Genomes

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Metagenomics Analysis- Day 2:43:53

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Metagenome Binning 0:09:37

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Metagenomic Sequence Classification 0:56:27

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Interactive and Reproducible 0:28:40

Interactive and Reproducible Metagenomics Data Analysis with MEGAN6 UE and MORPHEUS

EBI Metagenomics: analysing 0:34:30

EBI Metagenomics: analysing and exploring metagenomics data

Metagenome-assembled Genome Extraction 0:54:18

Metagenome-assembled Genome Extraction and Analysis

The Evolution of 0:05:37

The Evolution of Metagenomic Sequencing

Using NGS Analysis 2:10:55

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Microbiome Analysis Methods 0:48:37

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Комментарии
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I am following this course from outside UCLA. I wonder if its possible to complete this course on my ubuntu machine.

kiterunner
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NSG exp, Is read length 151 bp before qc is valid?

sumitha
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I'm not sure if I phrased the question right. But what if I am not affiliated with UCLA, are there any alternative remote software or programs to Hoffman2 Cluster that you can recommend? Thank you.

royal