NCBI Minute: Using NCBI Datasets Command-line Tools to Access Data and Metadata for Genomes

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Presented September 22, 2021. In this webinar you learn to use the datasets command-line tools (datasets and dataformat) to access, filter, download, and format data and metadata for genomes. Through examples from eukaryotes and the SARS-CoV-2 coronavirus, you see how to use metadata to filter for genome sequences with desired properties such as genomes with high contig N50 values.

00:00 Webinar introduction
01:05 Datasets introduction
03:30 Example #1
13:40 Example #2
21:48 Question/Answer
  1. National Library of Medicine
  2. ncbi
  3. min
  4. CGR
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