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Using JMP in a breeding program to check for outliers and run quick analyses
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JMP has become my favorite tool for a "quick and dirty" analysis of breeding program data, especially outlier detection.
Here I show how I go from a spreadsheet of data collected by a breeding program to identify which observations should be removed (or collected again) and run some simple analyses.
Data quality and outlier detection
Variance component estimates
Fixed effect outlier detection
Best Linear Unbiased Estimaters (BLUPs)
Best Linear Unbiased Predictors (BLUEs)
Here I show how I go from a spreadsheet of data collected by a breeding program to identify which observations should be removed (or collected again) and run some simple analyses.
Data quality and outlier detection
Variance component estimates
Fixed effect outlier detection
Best Linear Unbiased Estimaters (BLUPs)
Best Linear Unbiased Predictors (BLUEs)
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