Comprehensive Antibiotic Resistance Database (CARD) | Lecture 76 | Dr. Muhammad Naveed

preview_player
Показать описание
Comprehensive Antibiotic Resistance Database (CARD)

A bioinformatic database of resistance genes, their products and associated phenotypes. 6657 Ontology Terms, 5031 Reference Sequences, 1931 SNPs, 3013 Publications, 5078 AMR Detection Models Resistome predictions: 377 pathogens, 21079 chromosomes, 2662 genomic islands, 41828 plasmids, 155606 WGS assemblies, 322710 alleles.

Browse
The CARD is a rigorously curated collection of characterized, peer-reviewed resistance determinants and associated antibiotics, organized by the Antibiotic Resistance Ontology (ARO) and AMR gene detection models.

Analyze
The CARD includes tools for the analysis of molecular sequences, including BLAST and the Resistance Gene Identifier (RGI) software for the prediction of resistome based on homology and SNP models.

Resistomes, Variants, & Prevalence
Computer-generated resistome predictions for 377 important pathogens. Includes sequence variants beyond those reported in the scientific literature, as well as prevalence statistics for AMR genes among pathogens, genomes, and plasmids.

About Dr. Muhammad Naveed
(Associate Professor, Biotechnology, University of Central Punjab, Lahore)
With distinction, Dr. Muhammad Naveed obtained a Ph.D. degree in Biotechnology (Genomics & Bioinformatics) from Quaid-e-Azam University, Islamabad. He has won Ph.D. indigenous & IRSIP scholarships from HEC. He has done Pre-Doc research at the University of Ghent, Belgium. HEC awarded him the best Ph.D. (IRSIP) Scholar of the year in 2013 & QAU honored him as a “Distinguished Alumni” in 2017. He is doing research projects in Bioinformatics, Molecular Biotechnology & Vaccine designing, and Drug designing against infectious diseases. He has supervised 70 MSc. and 60 MPhil. & 01 Ph.D. students. He has published 102 Research articles with 504 impact factors, 1850 citations, 01 book, and 03 book chapters. He has been awarded the distinguished “Researcher of the Year” in 2016 (UoG) and 2018, 2019 & 2021 (UCP).
#CARD #antibiotics #database
Рекомендации по теме
Комментарии
Автор

Sir I am using NGS data from SRA NCBI I want to check AMR from CARD but it requires fasta or genbank assession ids where can I find their genbank ID's

muhammadubaid
Автор

Sir f u have uploaded any video on Blossum 62 matrices, plz share link with me

majidshah
Автор

A.o.A sir plzzz make videos on SnapGene

motivator
Автор

Sir g Artificial intelligence pe video upload kere please

naveedalam
Автор

Thank you. But is there an English version or a translation for the video?

malakhajar
Автор

Sir can u make videos on micro Rna prediction

laraibzara
Автор

Can anyone translate to English pleeaaase 🥺😭

rahmaazri