Все публикации

Understanding Sequence Alignment

Understanding Sequence Alignment Algorithms: with Needleman-Wunsch

Creating a sequence

Creating a sequence logo of 5-letter words for Wordle

Finding DNA Motifs:

Finding DNA Motifs: Information Content, MEME, and JASPAR

Position-specific Scoring Matrices

Position-specific Scoring Matrices (PSSMs): Theory and Biopython

DNA Palindromes

DNA Palindromes

Introducing k-mers: sequences

Introducing k-mers: sequences of length k

Extracting transcripts from

Extracting transcripts from a GTF file and genome FASTA file using basic python

Reading Large Genome-Size

Reading Large Genome-Size FASTA Files using Basic Python

Reading a FASTA

Reading a FASTA file with basic python

Reading tab-delimited files

Reading tab-delimited files using basic python

Consensus Sequences and

Consensus Sequences and Biopython

Parsing FASTQ files

Parsing FASTQ files with the Biopython SeqIO module

Introducing FASTQ Files

Introducing FASTQ Files

Introducing the Biopython

Introducing the Biopython SeqIO Module: Reading FASTA files

Introducing Biopython Seq

Introducing Biopython Seq Objects

Reading and Writing

Reading and Writing Files, File Handles

Finding the Longest

Finding the Longest Open Reading Frame (ORF) in an RNA Sequence

Reverse Complement using

Reverse Complement using Basic Python

Examining DNA Sequence

Examining DNA Sequence Content with Basic Python

Introducing Iterable Objects

Introducing Iterable Objects and For Loops

More Python Operators:

More Python Operators: 'is', 'in' and 'not'

Introducing Boolean Control

Introducing Boolean Control Structures: If-statements and While-loops

Introducing Dictionaries in

Introducing Dictionaries in Python

Introducing Lists in

Introducing Lists in Python