A bioinformatics tutorial on how to merge multiple vcfs using bcftools

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  1. Bioinformatics Coach
  2. variant
  3. calling
  4. snps
  5. indels
  6. vcf
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Комментарии
Автор

How to address the issue about "duplicated names" ? Is there a better way to solve that other than using --force-samples?

c.p.
Автор

Thank you so much for the nice tutorial may you please explain what this ::: stands for and also -p?

saraalidadiani
Автор

may you please copy the link of the other video which you mentioned at the end of this session to compare the number of variants in the original vcf file and then merge ...? I could not find that video

saraalidadiani
Автор

Thank you so much for your effort, unfortunately the very last step didn't work but because of my files having duplicate samples

imanemorjane
Автор

Hi coach, can we unmerge the combined vcf file?

michaelmaina
Автор

Hello! That's a wonderful tutorial. I just had one question though. Should the vcf files being merged have same header lines?

diyap